MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Jeotgalicoccus nanhaiensis
19428wE5_W307
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 28
bases: 2,247,970 bps
CDS: 2,232
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,295
Total number of protein coding genes annotated/found:
2,232
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5028|JADGLW010000003.1
SEQF5028_01098
Genome Viewer
NA
AA
597/199
1024-428
Recombination protein RecR
SEQF5028|JADGLW010000003.1
SEQF5028_01099
Genome Viewer
NA
AA
324/108
1348-1025
Nucleoid-associated protein YbaB
SEQF5028|JADGLW010000003.1
SEQF5028_01100
Genome Viewer
NA
AA
1641/547
3058-1418
Holliday junction ATP-dependent DNA helicase RuvB
SEQF5028|JADGLW010000003.1
SEQF5028_01101
Genome Viewer
NA
AA
939/313
4427-3489
hypothetical protein
SEQF5028|JADGLW010000003.1
SEQF5028_01102
Genome Viewer
NA
AA
801/267
5220-4420
putative ABC transporter ATP-binding protein YlmA
SEQF5028|JADGLW010000003.1
SEQF5028_01103
Genome Viewer
NA
AA
447/149
5788-5342
putative lipoprotein YehR
SEQF5028|JADGLW010000003.1
SEQF5028_01104
Genome Viewer
NA
AA
936/312
6014-6949
Stress response protein YsnF
SEQF5028|JADGLW010000003.1
SEQF5028_01105
Genome Viewer
NA
AA
1737/579
8790-7054
Gluconate 2-dehydrogenase flavoprotein
SEQF5028|JADGLW010000003.1
SEQF5028_01106
Genome Viewer
NA
AA
792/264
9602-8811
Gluconate 2-dehydrogenase subunit 3
SEQF5028|JADGLW010000003.1
SEQF5028_01107
Genome Viewer
NA
AA
435/145
9776-10210
hypothetical protein
SEQF5028|JADGLW010000003.1
SEQF5028_01108
Genome Viewer
NA
AA
417/139
10313-10729
hypothetical protein
SEQF5028|JADGLW010000003.1
SEQF5028_01109
Genome Viewer
NA
AA
1293/431
10784-12076
D-serine dehydratase
SEQF5028|JADGLW010000003.1
SEQF5028_01110
Genome Viewer
NA
AA
792/264
12916-12125
hypothetical protein
SEQF5028|JADGLW010000003.1
SEQF5028_01111
Genome Viewer
NA
AA
1197/399
14218-13022
putative MFS-type transporter YfcJ
SEQF5028|JADGLW010000003.1
SEQF5028_01112
Genome Viewer
NA
AA
1416/472
15698-14283
hypothetical protein
SEQF5028|JADGLW010000003.1
SEQF5028_01113
Genome Viewer
NA
AA
522/174
15824-16345
Pyridoxine/pyridoxamine 5'-phosphate oxidase
SEQF5028|JADGLW010000003.1
SEQF5028_01114
Genome Viewer
NA
AA
519/173
16435-16953
Spermidine/spermine N(1)-acetyltransferase
SEQF5028|JADGLW010000003.1
SEQF5028_01115
Genome Viewer
NA
AA
1206/402
16975-18180
putative transporter YycB
SEQF5028|JADGLW010000003.1
SEQF5028_01116
Genome Viewer
NA
AA
225/75
18467-18243
hypothetical protein
SEQF5028|JADGLW010000003.1
SEQF5028_01117
Genome Viewer
NA
AA
972/324
19457-18486
F420-dependent glucose-6-phosphate dehydrogenase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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